EnhancerDB
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  3. rs4973454[chr2:232482620]
Enhancers that have rs4973454[chr2:232482620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4973454[chr2:232482620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232482609 232482625 ZNF143 JASPAR yes 81726691
chr2 232482613 232482623 HOXA13 JASPAR yes 81726692
chr2 232482613 232482623 HOXB13 JASPAR yes 81726693
chr2 232482613 232482623 HOXD13 JASPAR yes 81726694
chr2 232482614 232482623 CDX1 JASPAR yes 81726695
chr2 232482614 232482625 CDX2 JASPAR yes 81726696
chr2 232482615 232482629 ONECUT3 JASPAR yes 81726697
Genes associated with rs4973454[chr2:232482620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More