EnhancerDB
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  3. rs505912[chr1:231532020]
Enhancers that have rs505912[chr1:231532020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs505912[chr1:231532020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231531697 231532720 ZNF274 GTRD no Bone Marrow (K562) 107879320
chr1 231531851 231532510 ZNF274 GTRD no Bone Marrow (K562) 107879321
chr1 231531852 231532546 ZNF274 GTRD no Bone Marrow (K562) 107879322
chr1 231531901 231532500 ZNF143 GTRD no Epithelial (MCF-7) 21392104
chr1 231531901 231532500 ZNF143 GTRD no Epithelial (MCF-7) 107879323
chr1 231531901 231532502 ZNF143 GTRD no Epithelial (MCF-7) 21392105
chr1 231531901 231532502 ZNF143 GTRD no Epithelial (MCF-7) 107879324
chr1 231531915 231532456 ZNF274 GTRD no Bone Marrow (K562) 107879325
chr1 231531937 231532649 ZNF274 GTRD no Cervix (HeLa-S3) 21392106
chr1 231531937 231532649 ZNF274 GTRD no Cervix (HeLa-S3) 107879326
chr1 231531948 231532515 ZNF143 GTRD no Epithelial (MCF-7) 21392107
chr1 231531948 231532515 ZNF143 GTRD no Epithelial (MCF-7) 107879327
chr1 231531999 231532020 IRF1 JASPAR yes 36089179
chr1 231532006 231532021 MEF2C JASPAR yes 36089180
chr1 231532017 231532022 NFY TRANSFAC yes 36089181
chr1 231532020 231532025 TFAP2A TRANSFAC yes 36089182
chr1 231532020 231532026 MZF1 JASPAR yes 36089183
Genes associated with rs505912[chr1:231532020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More