EnhancerDB
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Enhancers that have rs507554[chr1:229200477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229191845 229208275 enh12759
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Blood (T-cell) Esophagus Liver Lung (A549) Stomach Placenta Thyroid Uterus Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs507554[chr1:229200477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229198941 229200734 ZNF274 GTRD no Cervix (HeLa-S3) 21389660
chr1 229199010 229200701 ZNF274 GTRD no Cervix (HeLa-S3) 21389666
chr1 229199026 229200541 ZNF274 GTRD no Cervix (HeLa-S3) 21389667
chr1 229199145 229201337 ZNF274 GTRD no Cervix (HeLa-S3) 21389676
chr1 229199170 229200677 ZNF274 GTRD no Cervix (HeLa-S3) 21389680
chr1 229199483 229200562 ZNF274 GTRD no Cervix (HeLa-S3) 21389703
chr1 229199937 229200501 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389709
chr1 229200022 229200538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389711
chr1 229200078 229200702 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389717
chr1 229200105 229200649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389723
chr1 229200108 229200564 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389724
chr1 229200145 229200485 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389729
chr1 229200229 229200559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389733
chr1 229200236 229200632 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389734
chr1 229200240 229200557 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389735
chr1 229200247 229200577 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389736
chr1 229200280 229200640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389737
chr1 229200281 229200541 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389738
chr1 229200282 229200652 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389739
chr1 229200285 229200655 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389740
chr1 229200290 229200566 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389741
chr1 229200337 229200574 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389742
chr1 229200343 229200567 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389743
chr1 229200364 229200620 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21389744
chr1 229200463 229200481 ESR2 JASPAR yes 35957059
chr1 229200465 229200485 ESR1 JASPAR yes 35957060
chr1 229200477 229200481 H1TF2 TRANSFAC yes 35957061
chr1 229200477 229200481 NFE TRANSFAC yes 35957062
chr1 229200477 229200481 SRF TRANSFAC yes 35957063
Genes associated with rs507554[chr1:229200477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More