EnhancerDB
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  3. rs508840[chr1:231542856]
Enhancers that have rs508840[chr1:231542856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231540925 231559675 enh985
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Heart
Transcript factors that have rs508840[chr1:231542856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231542839 231542859 ESR1 JASPAR yes 36089838
chr1 231542842 231542860 ESR2 JASPAR yes 36089839
chr1 231542843 231542860 ESR1 JASPAR yes 36089840
chr1 231542843 231542861 ESR2 JASPAR yes 36089841
chr1 231542843 231542861 RARA JASPAR yes 36089842
chr1 231542844 231542859 ESR2 JASPAR yes 36089843
chr1 231542844 231542864 ESR1 JASPAR yes 36089844
chr1 231542848 231542863 SOX21 JASPAR yes 36089846
chr1 231542851 231542863 YY1 JASPAR yes 36089847
chr1 231542852 231542870 SRF JASPAR yes 36089848
chr1 231542853 231542868 MEF2C JASPAR yes 36089849
chr1 231542856 231542860 YY1 TRANSFAC yes 36089850
Genes associated with rs508840[chr1:231542856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More