EnhancerDB
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  3. rs514628[chr1:55043072]
Enhancers that have rs514628[chr1:55043072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs514628[chr1:55043072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55043058 55043079 IRF1 JASPAR yes 28994812
chr1 55043060 55043075 STAT2 JASPAR yes 28994813
chr1 55043070 55043085 HSF1 JASPAR yes 28994815
chr1 55043071 55043084 HSF2 JASPAR yes 28994816
Genes associated with rs514628[chr1:55043072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More