EnhancerDB
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  3. rs524729[chr1:27363003]
Enhancers that have rs524729[chr1:27363003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27351515 27365695 enh11658
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs524729[chr1:27363003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27362985 27363006 IRF1 JASPAR yes 27671462
chr1 27362986 27363007 IRF1 JASPAR yes 27671464
chr1 27362987 27363008 IRF1 JASPAR yes 27671466
chr1 27362988 27363003 FOXP1 JASPAR yes 27671467
chr1 27362989 27363004 FOXP1 JASPAR yes 27671468
chr1 27362991 27363012 IRF1 JASPAR yes 27671469
chr1 27362992 27363013 IRF1 JASPAR yes 27671470
chr1 27362995 27363009 SPIC JASPAR yes 27671471
chr1 27362996 27363010 SPIC JASPAR yes 27671472
chr1 27362996 27363010 STAT1 JASPAR yes 27671473
chr1 27362996 27363011 PRDM1 JASPAR yes 27671474
chr1 27362996 27363011 STAT2 JASPAR yes 27671475
chr1 27362997 27363018 IRF1 JASPAR yes 27671476
chr1 27363000 27363005 ETS2 TRANSFAC yes 27671477
chr1 27363001 27363016 PRDM1 JASPAR yes 27671478
chr1 27363001 27363016 STAT2 JASPAR yes 27671479
Genes associated with rs524729[chr1:27363003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More