EnhancerDB
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  3. rs527261542[chr3:119864819]
Enhancers that have rs527261542[chr3:119864819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs527261542[chr3:119864819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119864302 119864966 TFAP2A UCSC Txn Factor no Conserved 108530018
chr3 119864811 119864826 HNF4A JASPAR yes 5196254
chr3 119864812 119864826 NR2F1 JASPAR yes 5196255
chr3 119864812 119864826 RXRB JASPAR yes 5196256
chr3 119864812 119864826 RXRG JASPAR yes 5196257
chr3 119864812 119864827 HNF4G JASPAR yes 5196258
chr3 119864812 119864827 NR2C2 JASPAR yes 5196259
Genes associated with rs527261542[chr3:119864819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More