EnhancerDB
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  3. rs527490953[chr2:227627088]
Enhancers that have rs527490953[chr2:227627088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227617325 227640615 enh6179
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs527490953[chr2:227627088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227627068 227627089 IRF1 JASPAR yes 81493390
chr2 227627073 227627088 FOXP1 JASPAR yes 81493393
chr2 227627073 227627094 IRF1 JASPAR yes 81493394
chr2 227627074 227627089 FOXP1 JASPAR yes 81493395
chr2 227627074 227627095 IRF1 JASPAR yes 81493396
chr2 227627075 227627090 FOXP1 JASPAR yes 81493397
chr2 227627076 227627097 IRF1 JASPAR yes 81493398
chr2 227627077 227627092 FOXP1 JASPAR yes 81493399
chr2 227627078 227627093 STAT2 JASPAR yes 81493400
chr2 227627078 227627099 IRF1 JASPAR yes 81493401
chr2 227627079 227627094 FOXP1 JASPAR yes 81493402
chr2 227627080 227627101 IRF1 JASPAR yes 81493403
chr2 227627082 227627103 IRF1 JASPAR yes 81493404
chr2 227627084 227627099 PRDM1 JASPAR yes 81493405
chr2 227627086 227627101 PRDM1 JASPAR yes 81493406
Genes associated with rs527490953[chr2:227627088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More