EnhancerDB
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  3. rs527496361[chr12:52603551]
Enhancers that have rs527496361[chr12:52603551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs527496361[chr12:52603551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52603096 52603826 TCF7L2 GTRD no Colon (HCT116) 21546697
chr12 52603289 52603593 TCF7L2 GTRD no Colon (HCT116) 21546698
chr12 52603355 52603766 TCF7L2 GTRD no Colon (HCT116) 21546699
chr12 52603540 52603553 ELF1 JASPAR yes 120928296
chr12 52603541 52603553 ELF4 JASPAR yes 120928297
chr12 52603542 52603553 ETV2 JASPAR yes 120928298
chr12 52603543 52603553 ELK3 JASPAR yes 120928299
chr12 52603543 52603553 ERF JASPAR yes 120928300
chr12 52603543 52603553 ERG JASPAR yes 120928301
chr12 52603543 52603553 ETS1 JASPAR yes 120928302
chr12 52603543 52603553 ETV6 JASPAR yes 120928303
chr12 52603543 52603553 FEV JASPAR yes 120928304
chr12 52603543 52603553 FLI1 JASPAR yes 120928305
chr12 52603543 52603553 GABPA JASPAR yes 120928306
chr12 52603543 52603554 ELK4 JASPAR yes 120928307
chr12 52603543 52603554 FLI1 JASPAR yes 120928308
chr12 52603544 52603552 EHF JASPAR yes 120928309
chr12 52603544 52603552 FEV JASPAR yes 120928310
chr12 52603545 52603552 SPI1 JASPAR yes 120928311
Genes associated with rs527496361[chr12:52603551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More