EnhancerDB
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  3. rs527516115[chr1:209571904]
Enhancers that have rs527516115[chr1:209571904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs527516115[chr1:209571904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209571836 209572366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21375216
chr1 209571836 209572366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865702
chr1 209571854 209572358 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21375217
chr1 209571854 209572358 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107865703
chr1 209571859 209572375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21375218
chr1 209571859 209572375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865704
chr1 209571863 209572367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21375219
chr1 209571863 209572367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865705
chr1 209571869 209572345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21375220
chr1 209571869 209572345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865706
chr1 209571871 209572447 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21375221
chr1 209571871 209572447 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107865707
chr1 209571903 209571914 BATF JASPAR yes 34971241
Genes associated with rs527516115[chr1:209571904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More