EnhancerDB
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  3. rs527647471[chr19:6111272]
Enhancers that have rs527647471[chr19:6111272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527647471[chr19:6111272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6109734 6111754 TCF7L2 GTRD no Colon (HCT116) 21844740
chr19 6109734 6111754 TCF7L2 GTRD no Colon (HCT116) 108377374
chr19 6109802 6112024 TCF7L2 GTRD no Colon (HCT116) 21844741
chr19 6109802 6112024 TCF7L2 GTRD no Colon (HCT116) 108377375
chr19 6109821 6111773 TCF7L2 GTRD no Colon (HCT116) 21844742
chr19 6109821 6111773 TCF7L2 GTRD no Colon (HCT116) 108377376
chr19 6109829 6111741 ZNF143 GTRD no Epithelial (MCF-7) 21844743
chr19 6109829 6111741 ZNF143 GTRD no Epithelial (MCF-7) 108377377
chr19 6110015 6112007 ZNF274 GTRD no Bone Marrow (K562) 21844744
chr19 6110015 6112007 ZNF274 GTRD no Bone Marrow (K562) 108377378
chr19 6110254 6111934 ZBTB33 GTRD no Lung (A549) 21844745
chr19 6110254 6111934 ZBTB33 GTRD no Lung (A549) 108377379
chr19 6110393 6111985 ZNF274 GTRD no Cervix (HeLa-S3) 21844746
chr19 6110393 6111985 ZNF274 GTRD no Cervix (HeLa-S3) 108377380
chr19 6110815 6112132 TCF7L2 GTRD no Colon (HCT116) 21844747
chr19 6110815 6112132 TCF7L2 GTRD no Colon (HCT116) 108377381
chr19 6110930 6112052 TCF7L2 GTRD no Colon (HCT116) 21844748
chr19 6110930 6112052 TCF7L2 GTRD no Colon (HCT116) 108377382
chr19 6111227 6112129 ZNF274 GTRD no Bone Marrow (K562) 21844749
chr19 6111227 6112129 ZNF274 GTRD no Bone Marrow (K562) 108377383
chr19 6111235 6111936 ZNF274 GTRD no Bone Marrow (K562) 21844750
chr19 6111235 6111936 ZNF274 GTRD no Bone Marrow (K562) 108377384
chr19 6111236 6111936 ZBTB33 GTRD no Lung (A549) 21844751
chr19 6111236 6111936 ZBTB33 GTRD no Lung (A549) 108377385
chr19 6111246 6111974 ZNF274 GTRD no Bone Marrow (K562) 21844752
chr19 6111246 6111974 ZNF274 GTRD no Bone Marrow (K562) 108377386
chr19 6111247 6111845 ZNF274 GTRD no Bone Marrow (K562) 21844753
chr19 6111247 6111845 ZNF274 GTRD no Bone Marrow (K562) 108377387
chr19 6111250 6112011 ZBTB33 GTRD no Lung (A549) 21844754
chr19 6111250 6112011 ZBTB33 GTRD no Lung (A549) 108377388
chr19 6111262 6111976 ZNF274 GTRD no Bone Marrow (K562) 21844755
chr19 6111262 6111976 ZNF274 GTRD no Bone Marrow (K562) 108377389
chr19 6111264 6111797 ZNF274 GTRD no Bone Marrow (K562) 21844756
chr19 6111264 6111797 ZNF274 GTRD no Bone Marrow (K562) 108377390
chr19 6111265 6111937 ZNF274 GTRD no Bone Marrow (K562) 21844757
chr19 6111265 6111937 ZNF274 GTRD no Bone Marrow (K562) 108377391
chr19 6111266 6111918 ZBTB33 GTRD no Lung (A549) 21844758
chr19 6111266 6111918 ZBTB33 GTRD no Lung (A549) 108377392
chr19 6111268 6111278 SP1 JASPAR yes 112258907
chr19 6111268 6112038 ZNF274 GTRD no Bone Marrow (K562) 21844759
chr19 6111268 6112038 ZNF274 GTRD no Bone Marrow (K562) 108377393
chr19 6111270 6111275 SP1 TRANSFAC yes 112258908
chr19 6111272 6111804 ZBTB33 GTRD no Lung (A549) 21844760
chr19 6111272 6111804 ZBTB33 GTRD no Lung (A549) 108377394
chr19 6111272 6111935 ZNF274 GTRD no Bone Marrow (K562) 21844761
chr19 6111272 6111935 ZNF274 GTRD no Bone Marrow (K562) 108377395
Genes associated with rs527647471[chr19:6111272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More