EnhancerDB
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  3. rs527665695[chr2:28858354]
Enhancers that have rs527665695[chr2:28858354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 28858256 28858580 vista30853
VISTA
Transcript factors that have rs527665695[chr2:28858354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28858110 28858394 NR3C1 UCSC Txn Factor no Conserved 108431647
chr2 28858345 28858356 ESRRA JASPAR yes 22025902
chr2 28858345 28858356 ESRRA JASPAR yes 72662049
chr2 28858350 28858359 HIC2 JASPAR yes 22025903
chr2 28858350 28858359 HIC2 JASPAR yes 72662050
chr2 28858353 28858357 LFA1 TRANSFAC yes 22025904
chr2 28858353 28858357 LFA1 TRANSFAC yes 72662051
Genes associated with rs527665695[chr2:28858354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More