EnhancerDB
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  3. rs527720948[chr19:2578175]
Enhancers that have rs527720948[chr19:2578175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs527720948[chr19:2578175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 21837210
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 108362532
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 21837211
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 108362533
chr19 2577820 2580234 TCF7L2 GTRD no Colon (HCT116) 108362534
chr19 2577826 2579974 ZNF274 GTRD no Cervix (HeLa-S3) 21837212
chr19 2577826 2579974 ZNF274 GTRD no Cervix (HeLa-S3) 108362535
chr19 2577826 2580119 ZNF274 GTRD no Blood (GM12878) 21837213
chr19 2577826 2580119 ZNF274 GTRD no Blood (GM12878) 108362536
chr19 2577855 2580415 ZBTB33 GTRD no Lung (A549) 108362537
chr19 2577857 2579978 ZBTB33 GTRD no Lung (A549) 108362538
chr19 2577915 2580286 ZNF274 GTRD no Cervix (HeLa-S3) 21837214
chr19 2577915 2580286 ZNF274 GTRD no Cervix (HeLa-S3) 108362539
chr19 2577941 2579931 ZBTB33 GTRD no Brain (SK-N-SH) 21837215
chr19 2577941 2579931 ZBTB33 GTRD no Brain (SK-N-SH) 108362540
chr19 2577974 2580210 ZBTB33 GTRD no Lung (A549) 108362541
chr19 2577997 2580035 ZNF274 GTRD no Liver (HepG2) 21837216
chr19 2577997 2580035 ZNF274 GTRD no Liver (HepG2) 108362542
chr19 2578019 2579976 ZBTB33 GTRD no Lung (A549) 108362543
chr19 2578027 2580034 ZBTB33 GTRD no Lung (A549) 108362544
chr19 2578035 2579751 ZBTB33 GTRD no Brain (SK-N-SH) 21837217
chr19 2578035 2579751 ZBTB33 GTRD no Brain (SK-N-SH) 108362545
chr19 2578071 2579896 ZBTB33 GTRD no Brain (SK-N-SH) 21837218
chr19 2578071 2579896 ZBTB33 GTRD no Brain (SK-N-SH) 108362546
chr19 2578079 2579879 ZBTB33 GTRD no Brain (SK-N-SH) 21837219
chr19 2578079 2579879 ZBTB33 GTRD no Brain (SK-N-SH) 108362547
chr19 2578083 2579876 ZBTB33 GTRD no Lung (A549) 108362548
chr19 2578092 2579834 ZBTB33 GTRD no Brain (SK-N-SH) 21837220
chr19 2578092 2579834 ZBTB33 GTRD no Brain (SK-N-SH) 108362549
chr19 2578094 2579915 ZBTB33 GTRD no Brain (SK-N-SH) 21837221
chr19 2578094 2579915 ZBTB33 GTRD no Brain (SK-N-SH) 108362550
chr19 2578103 2579905 ZBTB33 GTRD no Brain (SK-N-SH) 21837222
chr19 2578103 2579905 ZBTB33 GTRD no Brain (SK-N-SH) 108362551
chr19 2578115 2579876 ZBTB33 GTRD no Lung (A549) 108362552
chr19 2578115 2579972 ZBTB33 GTRD no Lung (A549) 108362553
chr19 2578119 2579763 ZNF274 GTRD no Cervix (HeLa-S3) 21837223
chr19 2578119 2579763 ZNF274 GTRD no Cervix (HeLa-S3) 108362554
chr19 2578126 2580102 ZBTB33 GTRD no Lung (A549) 108362555
chr19 2578143 2579960 ZBTB33 GTRD no Brain (SK-N-SH) 21837224
chr19 2578143 2579960 ZBTB33 GTRD no Brain (SK-N-SH) 108362556
chr19 2578150 2579847 ZNF274 GTRD no Cervix (HeLa-S3) 21837225
chr19 2578150 2579847 ZNF274 GTRD no Cervix (HeLa-S3) 108362557
chr19 2578161 2579864 ZNF274 GTRD no Cervix (HeLa-S3) 21837226
chr19 2578161 2579864 ZNF274 GTRD no Cervix (HeLa-S3) 108362558
chr19 2578162 2578176 GLIS3 JASPAR yes 112077664
chr19 2578171 2579863 ZBTB33 GTRD no Brain (SK-N-SH) 21837227
chr19 2578171 2579863 ZBTB33 GTRD no Brain (SK-N-SH) 108362559
Genes associated with rs527720948[chr19:2578175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More