EnhancerDB
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  3. rs527754669[chr1:41342317]
Enhancers that have rs527754669[chr1:41342317]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41333905 41349008 enh11777
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs527754669[chr1:41342317]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41341255 41343559 ZNF143 GTRD no Epithelial (MCF-7) 107802934
chr1 41342303 41342318 JUND JASPAR yes 28349079
chr1 41342304 41342317 JUN JASPAR yes 28349080
chr1 41342312 41342322 HOXA13 JASPAR yes 28349081
chr1 41342312 41342322 HOXB13 JASPAR yes 28349082
chr1 41342312 41342322 HOXD13 JASPAR yes 28349083
chr1 41342312 41342328 POU4F3 JASPAR yes 28349084
chr1 41342313 41342324 FOXP2 JASPAR yes 28349085
chr1 41342315 41342323 FOXG1 JASPAR yes 28349086
chr1 41342315 41342323 FOXO3 JASPAR yes 28349087
chr1 41342315 41342324 SRY JASPAR yes 28349088
Genes associated with rs527754669[chr1:41342317], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More