EnhancerDB
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  3. rs527860674[chr17:55979540]
Enhancers that have rs527860674[chr17:55979540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs527860674[chr17:55979540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55979471 55979987 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773837
chr17 55979471 55979987 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274727
chr17 55979501 55979797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773838
chr17 55979501 55979797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274728
chr17 55979511 55979763 ESR1 UCSC Txn Factor no Conserved 108274729
chr17 55979512 55979868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773839
chr17 55979512 55979868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274730
chr17 55979514 55979924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773840
chr17 55979514 55979924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274731
chr17 55979517 55979841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773841
chr17 55979517 55979841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274732
chr17 55979517 55979915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773842
chr17 55979517 55979915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274733
chr17 55979533 55979546 SMAD2 JASPAR yes 54997148
Genes associated with rs527860674[chr17:55979540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More