EnhancerDB
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Enhancers that have rs527942800[chr16:370888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs527942800[chr16:370888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 368373 370900 ZNF274 GTRD no Bone Marrow (K562) 21683738
chr16 368373 370900 ZNF274 GTRD no Bone Marrow (K562) 108170065
chr16 368419 371886 ZNF274 GTRD no Blood (GM12878) 108170066
chr16 368676 371439 ZBTB33 GTRD no Lung (A549) 108170068
chr16 368894 371451 ZNF274 GTRD no Blood (GM12878) 108170071
chr16 369125 370983 ZBTB33 GTRD no Brain (SK-N-SH) 21683744
chr16 369125 370983 ZBTB33 GTRD no Brain (SK-N-SH) 108170075
chr16 369177 370903 ZNF143 GTRD no Epithelial (MCF-7) 21683749
chr16 369177 370903 ZNF143 GTRD no Epithelial (MCF-7) 108170081
chr16 369255 370912 ZBTB33 GTRD no Lung (A549) 108170090
chr16 369407 372176 ZNF274 GTRD no Bone Marrow (K562) 21683771
chr16 369407 372176 ZNF274 GTRD no Bone Marrow (K562) 108170104
chr16 369532 370900 ZNF274 GTRD no Bone Marrow (K562) 21683775
chr16 369532 370900 ZNF274 GTRD no Bone Marrow (K562) 108170110
chr16 369600 371462 TCF7L2 GTRD no Colon (HCT116) 21683777
chr16 369600 371462 TCF7L2 GTRD no Colon (HCT116) 108170112
chr16 369688 371515 ZBTB33 GTRD no Lung (A549) 108170116
chr16 369773 371170 ZBTB33 GTRD no Lung (A549) 108170121
chr16 370880 370894 XBP1 JASPAR yes 9104036
chr16 370885 370897 CREB1 JASPAR yes 9104037
chr16 370886 370891 ATF1 TRANSFAC yes 9104038
Genes associated with rs527942800[chr16:370888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More