EnhancerDB
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  3. rs527978352[chr12:50648830]
Enhancers that have rs527978352[chr12:50648830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50631905 50661889 enh14703
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs527978352[chr12:50648830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50648811 50648831 RREB1 JASPAR yes 120823185
chr12 50648812 50648832 RREB1 JASPAR yes 120823186
chr12 50648814 50648835 IRF1 JASPAR yes 120823188
chr12 50648816 50648836 RREB1 JASPAR yes 120823190
chr12 50648818 50648833 STAT2 JASPAR yes 120823192
chr12 50648819 50648831 IRF1 JASPAR yes 120823193
chr12 50648819 50648834 FOXP1 JASPAR yes 120823194
chr12 50648819 50648840 IRF1 JASPAR yes 120823195
chr12 50648820 50648841 IRF1 JASPAR yes 120823196
chr12 50648821 50648841 RREB1 JASPAR yes 120823197
chr12 50648824 50648839 FOXP1 JASPAR yes 120823198
chr12 50648824 50648845 IRF1 JASPAR yes 120823199
chr12 50648826 50648846 RREB1 JASPAR yes 120823200
Genes associated with rs527978352[chr12:50648830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More