EnhancerDB
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  3. rs527994533[chr1:21654230]
Enhancers that have rs527994533[chr1:21654230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs527994533[chr1:21654230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21654222 21654235 TFAP2A JASPAR yes 27296718
chr1 21654222 21654235 TFAP2B JASPAR yes 27296719
chr1 21654222 21654235 TFAP2C JASPAR yes 27296720
chr1 21654225 21654234 TFAP2A JASPAR yes 27296721
Genes associated with rs527994533[chr1:21654230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More