EnhancerDB
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  3. rs528090561[chr5:172161772]
Enhancers that have rs528090561[chr5:172161772]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs528090561[chr5:172161772]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172161766 172161779 ZBTB18 JASPAR yes 67819619
chr5 172161767 172161779 PKNOX1 JASPAR yes 67819620
chr5 172161767 172161779 TGIF1 JASPAR yes 67819621
chr5 172161768 172161777 SNAI2 JASPAR yes 67819622
chr5 172161768 172161778 FIGLA JASPAR yes 67819623
chr5 172161768 172161778 ID4 JASPAR yes 67819624
chr5 172161768 172161778 TCF3 JASPAR yes 67819625
chr5 172161768 172161778 TCF4 JASPAR yes 67819626
chr5 172161770 172161779 ZEB1 JASPAR yes 67819627
chr5 172161770 172161780 TBX21 JASPAR yes 67819628
chr5 172161771 172161779 MGA JASPAR yes 67819629
chr5 172161771 172161779 TBX15 JASPAR yes 67819630
chr5 172161771 172161779 TBX1 JASPAR yes 67819631
chr5 172161771 172161779 TBX4 JASPAR yes 67819632
chr5 172161771 172161779 TBX5 JASPAR yes 67819633
chr5 172161771 172161781 TBR1 JASPAR yes 67819634
chr5 172161771 172161784 SMAD2 JASPAR yes 67819635
Genes associated with rs528090561[chr5:172161772], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More