EnhancerDB
  1. Home
  2. SNP
  3. rs528200286[chr12:125388824]
Enhancers that have rs528200286[chr12:125388824]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs528200286[chr12:125388824]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125388814 125388835 IRF1 JASPAR yes 124431820
chr12 125388816 125388831 IRF9 JASPAR yes 124431821
chr12 125388818 125388836 IRF2 JASPAR yes 124431822
chr12 125388822 125389098 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21583323
Genes associated with rs528200286[chr12:125388824], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More