EnhancerDB
  1. Home
  2. SNP
  3. rs528397168[chr1:25027718]
Enhancers that have rs528397168[chr1:25027718]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528397168[chr1:25027718]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25027710 25027720 TBR1 JASPAR yes 27519927
chr1 25027712 25027724 PKNOX1 JASPAR yes 27519928
chr1 25027712 25027724 TGIF1 JASPAR yes 27519929
chr1 25027713 25027723 FIGLA JASPAR yes 27519930
chr1 25027713 25027723 ID4 JASPAR yes 27519931
chr1 25027713 25027723 TCF3 JASPAR yes 27519932
chr1 25027713 25027723 TCF4 JASPAR yes 27519933
chr1 25027714 25027723 SNAI2 JASPAR yes 27519934
chr1 25027715 25027720 USF2 TRANSFAC yes 27519935
Genes associated with rs528397168[chr1:25027718], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More