EnhancerDB
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  3. rs528477171[chr1:25065664]
Enhancers that have rs528477171[chr1:25065664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528477171[chr1:25065664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25065649 25065664 FOXP1 JASPAR yes 27525965
chr1 25065650 25065664 FOXF2 JASPAR yes 27525967
chr1 25065650 25065664 ONECUT3 JASPAR yes 27525968
chr1 25065652 25065667 MEF2A JASPAR yes 27525973
chr1 25065653 25065668 MEF2C JASPAR yes 27525974
chr1 25065654 25065666 MEF2A JASPAR yes 27525975
chr1 25065654 25065666 MEF2D JASPAR yes 27525976
Genes associated with rs528477171[chr1:25065664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More