EnhancerDB
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  3. rs528539580[chr12:52538201]
Enhancers that have rs528539580[chr12:52538201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs528539580[chr12:52538201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52538139 52539820 ZBTB33 GTRD no Lung (A549) 108033090
chr12 52538170 52539881 ZBTB33 GTRD no Lung (A549) 108033091
chr12 52538184 52538204 RREB1 JASPAR yes 120921435
chr12 52538189 52538210 ZNF263 JASPAR yes 120921436
chr12 52538194 52538204 SP1 JASPAR yes 120921437
chr12 52538195 52538203 SP1 TRANSFAC yes 120921438
chr12 52538195 52538204 SP1 TRANSFAC yes 120921439
chr12 52538195 52538205 SP1 JASPAR yes 120921440
chr12 52538196 52538201 SP1 TRANSFAC yes 120921441
chr12 52538196 52538207 E2F4 JASPAR yes 120921442
chr12 52538197 52538202 SP1 TRANSFAC yes 120921443
chr12 52538197 52538203 SP1 TRANSFAC yes 120921444
chr12 52538200 52538210 SP1 JASPAR yes 120921445
Genes associated with rs528539580[chr12:52538201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More