EnhancerDB
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  3. rs528725350[chr19:11060427]
Enhancers that have rs528725350[chr19:11060427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs528725350[chr19:11060427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11059353 11060655 TCF7L2 GTRD no Colon (HCT116) 21849300
chr19 11059419 11060574 TCF7L2 GTRD no Colon (HCT116) 21849301
chr19 11059509 11060534 TCF7L2 GTRD no Colon (HCT116) 21849302
chr19 11059571 11060694 TCF7L2 GTRD no Colon (HCT116) 21849303
chr19 11059619 11060661 ZNF143 GTRD no Epithelial (MCF-7) 21849304
chr19 11059773 11060647 ZNF143 GTRD no Epithelial (MCF-7) 21849305
chr19 11060119 11060868 ZNF143 GTRD no Epithelial (MCF-7) 21849307
chr19 11060143 11060733 ZNF274 GTRD no Bone Marrow (K562) 21849308
chr19 11060418 11060438 RREB1 JASPAR yes 112448380
chr19 11060419 11060433 IRF7 JASPAR yes 112448381
chr19 11060421 11060436 FOXP1 JASPAR yes 112448382
chr19 11060421 11060442 IRF1 JASPAR yes 112448383
chr19 11060422 11060443 IRF1 JASPAR yes 112448384
chr19 11060423 11060438 FOXP1 JASPAR yes 112448385
chr19 11060423 11060443 RREB1 JASPAR yes 112448386
chr19 11060423 11060444 IRF1 JASPAR yes 112448387
chr19 11060424 11060439 FOXP1 JASPAR yes 112448388
chr19 11060424 11060445 IRF1 JASPAR yes 112448389
chr19 11060425 11060440 FOXP1 JASPAR yes 112448390
chr19 11060426 11060441 FOXP1 JASPAR yes 112448391
chr19 11060426 11060447 IRF1 JASPAR yes 112448392
chr19 11060427 11060442 FOXP1 JASPAR yes 112448393
chr19 11060427 11060448 IRF1 JASPAR yes 112448394
Genes associated with rs528725350[chr19:11060427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More