EnhancerDB
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  3. rs528826975[chr18:55448635]
Enhancers that have rs528826975[chr18:55448635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528826975[chr18:55448635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55448075 55448665 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337925
chr18 55448631 55448643 TAL1 JASPAR yes 110885162
chr18 55448632 55448647 SCRT1 JASPAR yes 110885163
chr18 55448633 55448643 FIGLA JASPAR yes 110885164
chr18 55448633 55448643 MSC JASPAR yes 110885165
chr18 55448633 55448643 MYF6 JASPAR yes 110885166
chr18 55448633 55448643 TCF3 JASPAR yes 110885167
chr18 55448634 55448643 SNAI2 JASPAR yes 110885168
chr18 55448635 55448640 USF2 TRANSFAC yes 110885169
Genes associated with rs528826975[chr18:55448635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More