EnhancerDB
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  3. rs528866402[chr1:54767162]
Enhancers that have rs528866402[chr1:54767162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs528866402[chr1:54767162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804699
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804700
chr1 54767149 54767168 RFX2 JASPAR yes 28970578
chr1 54767153 54767163 NFATC3 JASPAR yes 28970580
chr1 54767153 54767169 RFX2 JASPAR yes 28970581
chr1 54767153 54767169 RFX3 JASPAR yes 28970582
chr1 54767153 54767169 RFX4 JASPAR yes 28970583
Genes associated with rs528866402[chr1:54767162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More