EnhancerDB
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  3. rs528983891[chr12:65028543]
Enhancers that have rs528983891[chr12:65028543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs528983891[chr12:65028543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65028535 65028546 CDX2 JASPAR yes 121418761
chr12 65028536 65028547 HOXA10 JASPAR yes 121418762
chr12 65028536 65028547 HOXC11 JASPAR yes 121418763
chr12 65028536 65028547 HOXC13 JASPAR yes 121418764
chr12 65028537 65028546 CDX1 JASPAR yes 121418765
chr12 65028537 65028547 HOXA13 JASPAR yes 121418766
chr12 65028537 65028547 HOXB13 JASPAR yes 121418767
chr12 65028537 65028547 HOXC10 JASPAR yes 121418768
chr12 65028537 65028547 HOXD11 JASPAR yes 121418769
chr12 65028537 65028547 HOXD13 JASPAR yes 121418770
chr12 65028539 65028554 FOXP1 JASPAR yes 121418771
chr12 65028540 65028555 FOXP1 JASPAR yes 121418772
chr12 65028540 65028561 IRF1 JASPAR yes 121418773
chr12 65028541 65028547 TBP TRANSFAC yes 121418774
chr12 65028541 65028556 FOXP1 JASPAR yes 121418775
chr12 65028541 65028562 IRF1 JASPAR yes 121418776
chr12 65028542 65028557 FOXP1 JASPAR yes 121418777
chr12 65028542 65028563 IRF1 JASPAR yes 121418778
chr12 65028543 65028558 FOXP1 JASPAR yes 121418779
chr12 65028543 65028564 IRF1 JASPAR yes 121418780
Genes associated with rs528983891[chr12:65028543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More