EnhancerDB
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  3. rs529000798[chr1:8978955]
Enhancers that have rs529000798[chr1:8978955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs529000798[chr1:8978955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8978945 8978959 RXRB JASPAR yes 26608999
chr1 8978945 8978959 RXRG JASPAR yes 26609000
chr1 8978954 8978968 PLAG1 JASPAR yes 26609001
chr1 8978954 8978969 HNF4G JASPAR yes 26609002
Genes associated with rs529000798[chr1:8978955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More