EnhancerDB
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  3. rs529116290[chr1:201738123]
Enhancers that have rs529116290[chr1:201738123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs529116290[chr1:201738123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201738081 201742956 ZNF143 GTRD no Epithelial (MCF-7) 107857096
chr1 201738081 201742956 ZNF143 GTRD no Epithelial (MCF-7) 107857097
chr1 201738082 201743153 ZNF143 GTRD no Epithelial (MCF-7) 107857098
chr1 201738082 201743153 ZNF143 GTRD no Epithelial (MCF-7) 107857099
chr1 201738119 201738134 NFYB JASPAR yes 34531306
chr1 201738121 201738137 NFYA JASPAR yes 34531307
Genes associated with rs529116290[chr1:201738123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More