EnhancerDB
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  3. rs529169679[chr1:155860164]
Enhancers that have rs529169679[chr1:155860164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs529169679[chr1:155860164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155858604 155860266 TEF1 GTRD no Bone (Osteoblast) 21341668
chr1 155858797 155861096 STAT3 GTRD no Blood (OCI-LY7) 21341683
chr1 155859228 155860639 TCF7L2 GTRD no Colon (HCT116) 21341717
chr1 155859263 155860561 ZNF143 GTRD no Epithelial (MCF-7) 21341721
chr1 155859284 155860165 ZNF143 GTRD no Epithelial (MCF-7) 21341723
chr1 155859717 155860936 TCF7L2 GTRD no Colon (HCT116) 21341726
chr1 155859782 155860793 ZNF143 GTRD no Epithelial (MCF-7) 21341727
chr1 155859923 155860843 TCF7L2 GTRD no Colon (HCT116) 21341728
chr1 155860023 155860639 TCF7L2 GTRD no Colon (HCT116) 21341729
chr1 155860153 155860164 NFKB1 JASPAR yes 32366023
Genes associated with rs529169679[chr1:155860164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More