EnhancerDB
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  3. rs529231029[chr1:19255840]
Enhancers that have rs529231029[chr1:19255840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529231029[chr1:19255840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19255824 19255842 ESR1 JASPAR yes 27162205
chr1 19255831 19255850 CTCF JASPAR yes 27162206
chr1 19255832 19255841 ZEB1 JASPAR yes 27162207
chr1 19255833 19255843 TCF4 JASPAR yes 27162208
chr1 19255835 19255840 USF2 TRANSFAC yes 27162209
chr1 19255840 19255850 SP1 JASPAR yes 27162210
chr1 19255840 19255861 ZNF263 JASPAR yes 27162211
Genes associated with rs529231029[chr1:19255840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More