EnhancerDB
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  3. rs529245982[chr2:28185243]
Enhancers that have rs529245982[chr2:28185243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529245982[chr2:28185243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28185238 28185251 ZBTB18 JASPAR yes 72603389
chr2 28185239 28185251 PKNOX1 JASPAR yes 72603390
chr2 28185239 28185251 TGIF1 JASPAR yes 72603391
chr2 28185240 28185249 SNAI2 JASPAR yes 72603392
chr2 28185240 28185250 FIGLA JASPAR yes 72603393
chr2 28185240 28185250 ID4 JASPAR yes 72603394
chr2 28185240 28185250 TCF3 JASPAR yes 72603395
chr2 28185240 28185250 TCF4 JASPAR yes 72603396
chr2 28185242 28185251 ZEB1 JASPAR yes 72603397
chr2 28185242 28185252 TBX21 JASPAR yes 72603398
chr2 28185243 28185251 MGA JASPAR yes 72603399
chr2 28185243 28185251 TBX15 JASPAR yes 72603400
chr2 28185243 28185251 TBX1 JASPAR yes 72603401
chr2 28185243 28185251 TBX4 JASPAR yes 72603402
chr2 28185243 28185251 TBX5 JASPAR yes 72603403
chr2 28185243 28185253 TBR1 JASPAR yes 72603404
chr2 28185243 28185256 SMAD2 JASPAR yes 72603405
Genes associated with rs529245982[chr2:28185243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More