EnhancerDB
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  3. rs529272163[chr17:42874483]
Enhancers that have rs529272163[chr17:42874483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs529272163[chr17:42874483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42874144 42874758 TCF7L2 GTRD no Colon (HCT116) 21762982
chr17 42874471 42874486 HNF1A JASPAR yes 54414633
chr17 42874472 42874485 HNF1B JASPAR yes 54414639
chr17 42874479 42874491 FOXC2 JASPAR yes 54414648
chr17 42874481 42874485 YY1 TRANSFAC yes 54414649
Genes associated with rs529272163[chr17:42874483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More