EnhancerDB
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  3. rs529296838[chr12:50993090]
Enhancers that have rs529296838[chr12:50993090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs529296838[chr12:50993090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50993074 50993095 IRF1 JASPAR yes 120850395
chr12 50993075 50993090 FOXP1 JASPAR yes 120850396
chr12 50993076 50993091 FOXP1 JASPAR yes 120850397
chr12 50993076 50993097 IRF1 JASPAR yes 120850398
chr12 50993077 50993092 FOXP1 JASPAR yes 120850399
chr12 50993077 50993098 IRF1 JASPAR yes 120850400
chr12 50993078 50993093 FOXP1 JASPAR yes 120850401
chr12 50993083 50993104 IRF1 JASPAR yes 120850402
chr12 50993090 50993105 HNF1A JASPAR yes 120850403
Genes associated with rs529296838[chr12:50993090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More