EnhancerDB
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  3. rs529401996[chr12:113678552]
Enhancers that have rs529401996[chr12:113678552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529401996[chr12:113678552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113678534 113678555 ZNF263 JASPAR yes 123819193
chr12 113678542 113678563 IRF1 JASPAR yes 123819194
chr12 113678546 113678567 IRF1 JASPAR yes 123819195
chr12 113678547 113678568 IRF1 JASPAR yes 123819196
chr12 113678548 113678569 IRF1 JASPAR yes 123819197
chr12 113678549 113678564 FOXP1 JASPAR yes 123819198
chr12 113678549 113678570 IRF1 JASPAR yes 123819199
chr12 113678550 113678571 IRF1 JASPAR yes 123819200
chr12 113678551 113678566 FOXP1 JASPAR yes 123819201
chr12 113678552 113678567 FOXP1 JASPAR yes 123819202
Genes associated with rs529401996[chr12:113678552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More