EnhancerDB
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  3. rs529431490[chr12:50953949]
Enhancers that have rs529431490[chr12:50953949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529431490[chr12:50953949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50953944 50953949 SP1 TRANSFAC yes 120843874
chr12 50953945 50953950 SP1 TRANSFAC yes 120843875
chr12 50953949 50953966 RXRA JASPAR yes 120843876
Genes associated with rs529431490[chr12:50953949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More