EnhancerDB
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  3. rs529464272[chr6:13428255]
Enhancers that have rs529464272[chr6:13428255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs529464272[chr6:13428255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13427953 13428867 NFIC UCSC Txn Factor no Conserved 108538597
chr6 13427977 13428828 RUNX3 UCSC Txn Factor no Conserved 108538598
chr6 13428239 13428256 PAX9 JASPAR yes 100029536
chr6 13428240 13428259 PAX5 JASPAR yes 100029537
chr6 13428250 13428259 HIC2 JASPAR yes 100029538
chr6 13428252 13428267 HNF4G JASPAR yes 100029539
chr6 13428253 13428257 LFA1 TRANSFAC yes 100029540
chr6 13428253 13428268 HNF4A JASPAR yes 100029541
Genes associated with rs529464272[chr6:13428255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More