EnhancerDB
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  3. rs529478178[chr6:30717326]
Enhancers that have rs529478178[chr6:30717326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529478178[chr6:30717326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539495
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539496
chr6 30717317 30717330 SMAD2 JASPAR yes 101043926
chr6 30717320 30717328 MEIS2 JASPAR yes 101043927
chr6 30717320 30717328 MEIS3 JASPAR yes 101043928
chr6 30717323 30717335 HNF1B JASPAR yes 101043930
Genes associated with rs529478178[chr6:30717326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More