EnhancerDB
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  3. rs529554440[chr16:89396376]
Enhancers that have rs529554440[chr16:89396376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529554440[chr16:89396376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89393784 89396777 AR GTRD no Prostate (PC-3) 21738244
chr16 89393784 89396777 AR GTRD no Prostate (PC-3) 108225702
chr16 89396136 89396791 ZNF274 GTRD no Bone Marrow (K562) 21738245
chr16 89396136 89396791 ZNF274 GTRD no Bone Marrow (K562) 108225703
chr16 89396346 89396890 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21738246
chr16 89396346 89396890 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108225704
chr16 89396372 89396385 SMAD2 JASPAR yes 12332013
Genes associated with rs529554440[chr16:89396376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More