EnhancerDB
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  3. rs529866520[chr6:35332208]
Enhancers that have rs529866520[chr6:35332208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35320605 35341715 enh9075
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529866520[chr6:35332208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35332196 35332208 HNF1B JASPAR yes 101276479
chr6 35332202 35332223 IRF1 JASPAR yes 101276480
chr6 35332204 35332219 PRDM1 JASPAR yes 101276482
chr6 35332204 35332219 STAT2 JASPAR yes 101276483
chr6 35332204 35332225 IRF1 JASPAR yes 101276484
chr6 35332205 35332226 IRF1 JASPAR yes 101276485
chr6 35332206 35332227 IRF1 JASPAR yes 101276486
chr6 35332207 35332222 FOXP1 JASPAR yes 101276487
chr6 35332207 35332228 IRF1 JASPAR yes 101276488
chr6 35332208 35332223 FOXP1 JASPAR yes 101276489
chr6 35332208 35332229 IRF1 JASPAR yes 101276490
Genes associated with rs529866520[chr6:35332208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More