EnhancerDB
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  3. rs530056991[chr1:19268534]
Enhancers that have rs530056991[chr1:19268534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530056991[chr1:19268534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19268529 19268542 ELF1 JASPAR yes 27164153
chr1 19268532 19268539 SPIB JASPAR yes 27164154
chr1 19268532 19268542 ETV6 JASPAR yes 27164155
chr1 19268532 19268542 GABPA JASPAR yes 27164156
chr1 19268532 19268543 ELK4 JASPAR yes 27164157
chr1 19268532 19268543 FLI1 JASPAR yes 27164158
chr1 19268533 19268541 EHF JASPAR yes 27164159
chr1 19268534 19268541 SPI1 JASPAR yes 27164160
Genes associated with rs530056991[chr1:19268534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More