EnhancerDB
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  3. rs530089498[chr1:226952372]
Enhancers that have rs530089498[chr1:226952372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226946305 226956154 enh12730
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Lung (A549) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Uterus Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs530089498[chr1:226952372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226951928 226952384 ZNF143 GTRD no Epithelial (MCF-7) 21387315
chr1 226951988 226952578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387316
chr1 226952160 226952540 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387318
chr1 226952188 226952572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387319
chr1 226952249 226952614 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387320
chr1 226952260 226952550 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387321
chr1 226952275 226952535 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387322
chr1 226952324 226952485 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387323
chr1 226952364 226952380 NFYA JASPAR yes 35841256
chr1 226952367 226952382 NFYB JASPAR yes 35841257
chr1 226952369 226952374 NFY TRANSFAC yes 35841258
Genes associated with rs530089498[chr1:226952372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More