EnhancerDB
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  3. rs530144202[chr6:12319431]
Enhancers that have rs530144202[chr6:12319431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs530144202[chr6:12319431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12319424 12319435 DUX4 JASPAR yes 99959819
chr6 12319425 12319446 IRF1 JASPAR yes 99959820
chr6 12319427 12319442 STAT2 JASPAR yes 99959821
chr6 12319429 12319441 IRF1 JASPAR yes 99959822
chr6 12319429 12319444 IRF9 JASPAR yes 99959823
Genes associated with rs530144202[chr6:12319431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More