EnhancerDB
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  3. rs530159540[chr1:155863746]
Enhancers that have rs530159540[chr1:155863746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs530159540[chr1:155863746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155863327 155863791 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21341749
chr1 155863337 155863793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341750
chr1 155863383 155863783 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341753
chr1 155863401 155863797 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341754
chr1 155863401 155863805 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341755
chr1 155863423 155864408 P63 GTRD no Skin (Keratinocyte) 21341757
chr1 155863434 155863784 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21341758
chr1 155863440 155863760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341759
chr1 155863440 155863810 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341760
chr1 155863443 155863827 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341761
chr1 155863444 155863780 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341762
chr1 155863445 155863885 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341763
chr1 155863449 155864434 P63 GTRD no Skin (Keratinocyte) 21341764
chr1 155863473 155863817 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341765
chr1 155863478 155863818 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341766
chr1 155863481 155863811 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341767
chr1 155863501 155863765 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341769
chr1 155863508 155864374 P63 GTRD no Skin (Keratinocyte) 21341770
chr1 155863510 155863750 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341771
chr1 155863523 155863853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341772
chr1 155863540 155863820 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341774
chr1 155863547 155864431 P63 GTRD no Skin (Keratinocyte) 21341776
chr1 155863550 155863780 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341777
chr1 155863715 155863821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341779
chr1 155863737 155863757 RREB1 JASPAR yes 32366625
chr1 155863741 155863761 RREB1 JASPAR yes 32366626
chr1 155863742 155863762 RREB1 JASPAR yes 32366627
chr1 155863745 155863751 TCF4 TRANSFAC yes 32366628
chr1 155863745 155863757 FOXI1 JASPAR yes 32366629
chr1 155863745 155863760 FOXP1 JASPAR yes 32366630
chr1 155863745 155863765 RREB1 JASPAR yes 32366631
chr1 155863746 155863766 RREB1 JASPAR yes 32366632
Genes associated with rs530159540[chr1:155863746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More