EnhancerDB
  1. Home
  2. SNP
  3. rs530185580[chr16:89543602]
Enhancers that have rs530185580[chr16:89543602]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs530185580[chr16:89543602]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89543590 89543611 IRF1 JASPAR yes 12348732
chr16 89543593 89543607 SPIC JASPAR yes 12348734
chr16 89543596 89543617 IRF1 JASPAR yes 12348735
chr16 89543600 89543615 FOXP1 JASPAR yes 12348736
chr16 89543601 89543616 FOXP1 JASPAR yes 12348737
chr16 89543602 89543617 FOXP1 JASPAR yes 12348738
Genes associated with rs530185580[chr16:89543602], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More