EnhancerDB
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  3. rs530238020[chr17:39059398]
Enhancers that have rs530238020[chr17:39059398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs530238020[chr17:39059398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39059358 39059754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757122
chr17 39059377 39059913 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757123
chr17 39059389 39059407 ESR1 JASPAR yes 54242122
chr17 39059389 39059407 ESR2 JASPAR yes 54242123
chr17 39059391 39059406 ESR2 JASPAR yes 54242124
chr17 39059391 39059411 ESR1 JASPAR yes 54242125
chr17 39059397 39059727 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757124
Genes associated with rs530238020[chr17:39059398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More