EnhancerDB
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  3. rs530254601[chr3:56878939]
Enhancers that have rs530254601[chr3:56878939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs530254601[chr3:56878939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56878928 56878945 ESR1 JASPAR yes 2602463
chr3 56878929 56878943 TLX1 JASPAR yes 2602464
chr3 56878930 56878944 TLX1 JASPAR yes 2602465
chr3 56878937 56878945 MEIS2 JASPAR yes 2602466
chr3 56878937 56878945 MEIS3 JASPAR yes 2602467
Genes associated with rs530254601[chr3:56878939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More