EnhancerDB
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  3. rs530280690[chr12:46953673]
Enhancers that have rs530280690[chr12:46953673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs530280690[chr12:46953673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46952391 46954018 AR GTRD no Prostate (PC-3) 21542602
chr12 46952391 46954018 AR GTRD no Prostate (PC-3) 108028039
chr12 46952713 46953699 ZNF274 GTRD no Cervix (HeLa-S3) 21542606
chr12 46952713 46953699 ZNF274 GTRD no Cervix (HeLa-S3) 108028045
chr12 46952874 46953973 ZNF274 GTRD no Cervix (HeLa-S3) 21542609
chr12 46952874 46953973 ZNF274 GTRD no Cervix (HeLa-S3) 108028050
chr12 46953671 46953676 GATA2 JASPAR yes 120638156
Genes associated with rs530280690[chr12:46953673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More