EnhancerDB
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  3. rs530399641[chr1:27880004]
Enhancers that have rs530399641[chr1:27880004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs530399641[chr1:27880004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27879999 27880014 TFAP2A JASPAR yes 27708071
chr1 27880000 27880014 NR2F1 JASPAR yes 27708072
Genes associated with rs530399641[chr1:27880004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More