EnhancerDB
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  3. rs530447789[chr2:28860166]
Enhancers that have rs530447789[chr2:28860166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530447789[chr2:28860166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28860160 28860175 MEF2C JASPAR yes 72662295
chr2 28860160 28860181 IRF1 JASPAR yes 72662296
chr2 28860162 28860177 FOXP1 JASPAR yes 72662297
chr2 28860163 28860178 FOXP1 JASPAR yes 72662298
chr2 28860164 28860170 TBP TRANSFAC yes 72662299
chr2 28860164 28860179 FOXP1 JASPAR yes 72662300
chr2 28860164 28860185 IRF1 JASPAR yes 72662301
chr2 28860165 28860180 FOXP1 JASPAR yes 72662302
chr2 28860165 28860186 IRF1 JASPAR yes 72662303
chr2 28860166 28860181 FOXP1 JASPAR yes 72662304
chr2 28860166 28860187 IRF1 JASPAR yes 72662305
Genes associated with rs530447789[chr2:28860166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More